SynBioHub is a repository for synthetic genetic designs represented in the Synthetic Biology Open Language (SBOL). To integrate SynBioHub into more synthetic biology workflows, its data processing capabilities need to be expanded. To this end, a …
Synthetic Biology is an emerging discipline which uses engineering principles to shape biological behavior. The Synthetic Biology Open Language (SBOL) is a standard for describing biological constructs which enables engineering workflows that …
Computational models are essential to engineer predictable biological systems and to scale up this process for complex systems. Computational modeling often requires expert knowledge and data to build models. Clearly, manual creation of models is not …
Biology is a very noisy field. Experiments are difficult to reproduce, the mechanisms behind life are not well understood, and data that we do obtain is difficult to make sense of. Much like traditional engineering fields where engineers draw from a …
The SynBioHub repository (https://synbiohub.org) is an open-source software project that facilitates the sharing of information about engineered biological systems. SynBioHub provides computational access for software and data integration, and a …
As the Synthetic Biology Open Language (SBOL) data and visual standards gain acceptance for describing genetic designs in a detailed and reproducible way, there is an increasing need for an intuitive sequence editor tool that biologists can use that …